I have a function on a Solidity contract that does a throw. Eg.
   function do(x,y)  {
        if ( msg.sender != owner )
            throw;
        // ...
   }
In the Truffle environment I have a test js something like:
//.... part of a promise chain
       .then(
            function (_bool0) {
                assert.isTrue(_bool0,"whoops - should be true");
                return contract.do( "okdoke" , {from: accounts[1]} );
            }).then(
            function (tx_id) {
                //..
                done();
            }
    // ...
The return contract.do() causes the condition that results in the throw. Which produces the following in the Truffle test output for this test:
Error: VM Exception while executing transaction: invalid JUMP